Mito Hacker
A set of tools to enable high-throughput analysis of mitochondrial network morphology  Github

OrganoSeg
Software for brightfield segmentation of organoids GitHub

ProteomeScoutAPI
API to analyze the ProteomeScout database download - i.e. the proteome through the lens of PTMs GitHub

RIPTiDe
Software for integration of profiling data with metabolic network models GitHub